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| Brøndby  - KF Tirana | 3 - 0 | 1 - 0 | 4 - 0 | | |
| Besiktas - HJK Helsinki | 2 - 0 | 1 - 1 | 3 - 1 | | |
| Bodø - Sampdoria | 3 - 2 | 0 - 2 | 3 - 4 | | |
| Chelsea - Viktoria Zizkov | 4 - 2 | 0 - 0 | 4 - 2 | | |
| Croatia Zagreb - Auxerre | 3 - 1 | 0 - 3 | 3 - 4 | | |
| CSKA Moskva - Ferencvaros | 2 - 1 | 1 - 2 | 3 - 3 | Ferencvaros vandt 7-6 på straffe | |
| Dundee United - Tatran Presov | 3 - 2 | 1 - 3 | 4 - 5 | | |
| Gloria Bistrita - Real Zaragoza | 2 - 1 | 0 - 4 | 2 - 5 | | |
| Grasshoppers - Chernomorets | 3 - 0 | 0 - 1 | 3 - 1 | | |
| Maccabi Tel Aviv - Werder Bremen | 0 - 0 | 0 - 2 | 0 - 2 | | |
| Maribor Branik - Austria Wien | 1 - 1 | 0 - 3 | 1 - 4 | | |
| Omonia Nicosia - Arsenal | 1 - 3 | 0 - 3 | 1 - 6 | | |
| Pirin - Panathinaikos | 0 - 2 | 1 - 6 | 1 - 8 | | |
| FC Porto - LKS Lodz | 2 - 0 | 1 - 0 | 3 - 0 | | |
| Sligo Rovers - Club Brugge | 1 - 2 | 1 - 3 | 2 - 5 | | |
| Zalgiris - Feyenoord | 1 - 1 | 1 - 2 | 2 - 3 | | |
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